Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885455.1_cds_XP_016439447.1_35002
CDS Infomation

[gene=LOC107765329] [db_xref=GeneID:107765329] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD11] [protein_id=XP_016439447.1] [location=complement(join(61847..62128,62780..62875,63101..63217,63803..64040,64127..64290,64990..65065,65624..65708,66051..66134,66614..66659))] [gbkey=CDS]
Sequence

ATGTCTATTCCTCATGAGGGAAATGCTGATAGCAACAATGTTTCAGGTTCTTGCCTCTAT
GAACTTCTGCAAATGGAATCATCTTCAAATTGTAGTGGTCCTCAACCAGATAGACGAAAG
CATTCTTCGAGTCCTCGACACAGACTACAGAGGCTGTTGAGTGAATCTGGCAATAGATTC
TGTGCAGATTGTGGATCTCCTGATCCAAAATGGGTATCTTTAAGTCTTGGAGTTTTTATA
TGTATCAAGTGCTCCGGAGTACATCGAAGCCTTGGAGTGCACATATCGAAGGTTCTGTCA
GTGAAGCTCGACGAATGGACAGACGACCAAGTTGATAGTTTGATAGATATGGGTGGAAAT
AATGCAGCAAACTTGAAGTATGAAGCTTCCATTCCTGATAGTTATCGGAAGCCCAGACCA
GATGCATCAATAGAAGAGCGTACTGACTTTATCAGGAGAAAATACGAGCTGCAGCAATTT
CTAAACTCTGATGTGCAGATGATCTGCCCCTTCCCACCATCATCATCCTCACGCTGCAAT
TCATTAAGCCTTTCTTGTAGTTTGGCCCTGGATAAGAGACATTATGAGAAGCAATCCACT
GGGCATCGCATCCATGGCATAGGGCATGCATTTCGTAATAGCTGGAGAAGGAAAGAATCT
GAACACAGGAGCACCAAGAAAAGTAACTCAATGGCAGGTATGGTTGAATTTATAGGATTG
ATAAAAGTCAATGTGGTGAGAGGGACCAACCTAGCTGTCCGTGATGTGGTAACAAGTGAT
CCTTATGTAATTCTCTCCTTGGGGAGCCAGTCAGTCAAGACGCGTGTCATCAAGAACAAT
CTTAACCCTGTCTGGAATGAAAAGCTAATGTTGTCAATTCCAGAAAATGTTCCTCCTTTG
AAAGTGCTTGTCTACGACAAGGATACATTTACAACTGACGACTTCATGGGGGAAGCTGAG
ATTGACATTCAGCCTCTTGTTACTGCTGCAAAAGCATCTGAAAACTCAACACTCAGTGAA
TCAATGCTGCTTGGGAAATGGAAAGCAAGCAAAGAAAACACTCTAGTTAAAGATGGCATT
ATCAGTCTAATAGATGGTAAGGTGAAACAGGATATCACTGTGAAGCTGCAGAATGTTGAA
AGGGGAATACTAGAGATTGAGCTTGAATGTGTTCCTCTCACACAATAA

Peptide Sequence

PEP ID

XP_016439447.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Nicotiana tabacum]
Sequence

MSIPHEGNADSNNVSGSCLYELLQMESSSNCSGPQPDRRKHSSSPRHRLQRLLSESGNRF
CADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQVDSLIDMGGN
NAANLKYEASIPDSYRKPRPDASIEERTDFIRRKYELQQFLNSDVQMICPFPPSSSSRCN
SLSLSCSLALDKRHYEKQSTGHRIHGIGHAFRNSWRRKESEHRSTKKSNSMAGMVEFIGL
IKVNVVRGTNLAVRDVVTSDPYVILSLGSQSVKTRVIKNNLNPVWNEKLMLSIPENVPPL
KVLVYDKDTFTTDDFMGEAEIDIQPLVTAAKASENSTLSESMLLGKWKASKENTLVKDGI
ISLIDGKVKQDITVKLQNVERGILEIELECVPLTQ

Transcript Sequence

Gene sequence data has not been registered.